Sweta Banerjee

Research Assistant



Hochschule Flensburg

Kanzleistraße 91-93, 24943 Flensburg, Germany



Research Experience


Leibniz‑Institut für Analytische Wissenschaften ‑ ISAS - e.V.

Wissenschaftliche Mitarbeiterin, Nov 2022 - Sept 2024

• Worked on various bioimage analysis tasks such as segmentation, classification, and denoising, using CNNs, Vision Transformers, NAS etc.
• Annotated and pretrained a 3D osteocyte segmentation dataset, which was part of the work published.
• Contributed to creating a large neutrophil cell‑tracking benchmark dataset by annotating the microscopic movies.

Weakly Supervised Cell Segmentation in Multi‐modality High‐Resolution Microscopy Images, NeurIPS 2022

Coordinator, May 2022 ‐ Sept 2022
• Annotated the data to be used for the competition.
• Wrote scripts to be used for the purpose of data analysis and running competition.

Medical and Environmental Computing Lab, TU Darmstadt

Research Intern, Aug 2021 - Jan 2022

• Implemented Lifelong nnUNet using Python and PyTorch on the QUBIQ 2021 dataset.
• Integrated uncertainty estimation methods into biomedical segmentation pipelines.
• Established baseline results for semantic segmentation and improved pipeline robustness.

EO Dashboard hackathon Open Science Award by NASA, ESA and JAXA

Our Team TRACER won the open science award for the solution that best demonstrated the use of open science principles, which includes transparency, inclusion, accessibility and reproducibility for the challenge ’Ship Traffic and the Impact of Air Quality’.
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